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cis-Encoded Small RNAs, a Conserved Mechanism for Repression of Polysaccharide Utilization in Bacteroides
Publication
Cao Y,
Förstner KU,
Vogel J,
Smith CJ
(2016)
Journal of Bacteriology, 198, 18, 2410-8, 10.1128/JB.00381-16, 27353652
Journal of Bacteriology, 198, 18, 2410-8, 10.1128/JB.00381-16, 27353652
The primary transcriptome of the Escherichia coli O104:H4 pAA plasmid and novel insights into its virulence gene expression and regulation
Publication
Berger P,
Knödler M,
Förstner KU,
Berger M,
Bertling C,
Sharma CM,
Vogel J,
Karch H,
Dobrindt U,
Mellmann A
(2016)
Scientific Reports, 6, 35307, 10.1038/srep35307, 27748404
Scientific Reports, 6, 35307, 10.1038/srep35307, 27748404
Gifsy-1 Prophage IsrK with Dual Function as Small and Messenger RNA Modulates Vital Bacterial Machineries
Publication
Hershko-Shalev T,
Odenheimer-Bergman A,
Elgrably-Weiss M,
Ben-Zvi T,
Govindarajan S,
Seri H,
Papenfort K,
Vogel J,
Altuvia S
(2016)
PLOS Genetics, 12, 4, e1005975, 10.1371/journal.pgen.1005975, 27057757
PLOS Genetics, 12, 4, e1005975, 10.1371/journal.pgen.1005975, 27057757
Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella
Publication
Papenfort K,
Espinosa E,
Casadesús J,
Vogel J
(2015)
PNAS, 112, 34, E4772-81, 10.1073/pnas.1507825112, 26307765
PNAS, 112, 34, E4772-81, 10.1073/pnas.1507825112, 26307765
dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42
Publication
Fan B,
Li L,
Chao Y,
Förstner K,
Vogel J,
Borriss R,
Wu X
(2015)
PLOS One, 10, 11, e0142002, 10.1371/journal.pone.0142002, 26540162
PLOS One, 10, 11, e0142002, 10.1371/journal.pone.0142002, 26540162
Investigating CRISPR RNA Biogenesis and Function Using RNA-seq
Publication
Heidrich N,
Dugar G,
Vogel J,
Sharma CM
(2015)
In: CRISPR: Methods and protocols (eds Lundgren M, Charpentier E, Fineran PC), Methods Mol Biol (Methods in Molecular Biology), 1311, 1-21, 10.1007/978-1-4939-2687-9_1, 25981463
In: CRISPR: Methods and protocols (eds Lundgren M, Charpentier E, Fineran PC), Methods Mol Biol (Methods in Molecular Biology), 1311, 1-21, 10.1007/978-1-4939-2687-9_1, 25981463
Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315
Publication
Sass AM,
van Acker H,
Förstner KU,
van Nieuwerburgh F,
Deforce D,
Vogel J,
Coenye T
(2015)
BMC Genomics, 16, 775, 10.1186/s12864-015-1993-3, 26462475
BMC Genomics, 16, 775, 10.1186/s12864-015-1993-3, 26462475
Recognition of the small regulatory RNA RydC by the bacterial Hfq protein
Publication
Dimastrogiovanni D,
Fröhlich KS,
Bandyra KJ,
Bruce HA,
Hohensee S,
Vogel J,
Luisi BF
(2014)
eLife, 3, e05375, 10.7554/eLife.05375, 25551292
eLife, 3, e05375, 10.7554/eLife.05375, 25551292
Meeting report: Regulating with RNA in Bacteria 2013
Publication
Vogel J,
Gottesman S,
Belasco J,
Narberhaus F
(2014)
RNA Biology, 11, 5, 403-12, 24922515
RNA Biology, 11, 5, 403-12, 24922515
β-Lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity
Publication
Gutierrez A,
Laureti L,
Crussard S,
Abida H,
Rodríguez-Rojas A,
Blázquez J,
Baharoglu Z,
Mazel D,
Darfeuille F,
Vogel J,
Matic I
(2013)
Nature Communications, 4, 1610, 10.1038/ncomms2607, 23511474
Nature Communications, 4, 1610, 10.1038/ncomms2607, 23511474