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Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA
Publication
Papenfort K,
Said N,
Welsink T,
Lucchini S,
Hinton JC,
Vogel J
(2009)
Molecular Microbiology, 74, 1, 139-158, 10.1111/j.1365-2958.2009.06857.x, 19732340
Molecular Microbiology, 74, 1, 139-158, 10.1111/j.1365-2958.2009.06857.x, 19732340
Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability
Publication
Jäger D,
Sharma CM,
Thomsen J,
Ehlers C,
Vogel J,
Schmitz RA
(2009)
PNAS, 106, 51, 21878-82, 10.1073/pnas.0909051106, 19996181
PNAS, 106, 51, 21878-82, 10.1073/pnas.0909051106, 19996181
Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides
Publication
Berghoff BA,
Glaeser J,
Sharma CM,
Vogel J,
Klug G
(2009)
Molecular Microbiology, 74, 6, 1497-512, 10.1111/j.1365-2958.2009.06949.x, 19906181
Molecular Microbiology, 74, 6, 1497-512, 10.1111/j.1365-2958.2009.06949.x, 19906181
Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes
Publication
Sittka A,
Sharma CM,
Rolle K,
Vogel J
(2009)
RNA Biology, 6, 3, 266-75, 19333007
RNA Biology, 6, 3, 266-75, 19333007
Acid stress activation of the sigma(E) stress response in Salmonella enterica serovar Typhimurium
Publication
Muller C,
Bang I,
Velayudhan J,
Karlinsey J,
Papenfort K,
Vogel J,
Fang FC
(2009)
Molecular Microbiology, 71, 5, 1228-38, 10.1111/j.1365-2958.2009.06597.x, 19170886
Molecular Microbiology, 71, 5, 1228-38, 10.1111/j.1365-2958.2009.06597.x, 19170886
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
Publication
Sittka A,
Lucchini S,
Papenfort K,
Sharma CM,
Rolle K,
Binnewies TT,
Hinton JC,
Vogel J
(2008)
PLOS Genetics, 4, 8, e1000163, 10.1371/journal.pgen.1000163, 18725932
PLOS Genetics, 4, 8, e1000163, 10.1371/journal.pgen.1000163, 18725932
Small RNA binding to 5' mRNA coding region inhibits translational initiation
Publication
Bouvier M,
Sharma CM,
Mika F,
Nierhaus KH,
Vogel J
(2008)
Molecular Cell, 32, 6, 827-837, 10.1016/j.molcel.2008.10.027, 19111662
Molecular Cell, 32, 6, 827-837, 10.1016/j.molcel.2008.10.027, 19111662
A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles
Publication
Song T,
Mika F,
Lindmark B,
Liu Z,
Schild S,
Bishop A,
Zhu J,
Camilli A,
Johansson J,
Vogel J,
Wai SN
(2008)
Molecular Microbiology, 70, 1, 100-111, 10.1111/j.1365-2958.2008.06392.x, 18681937
Molecular Microbiology, 70, 1, 100-111, 10.1111/j.1365-2958.2008.06392.x, 18681937
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis
Publication
Papenfort K,
Pfeiffer V,
Lucchini S,
Sonawane A,
Hinton JC,
Vogel J
(2008)
Molecular Microbiology, 68, 4, 890-906, 10.1111/j.1365-2958.2008.06189.x, 18399940
Molecular Microbiology, 68, 4, 890-906, 10.1111/j.1365-2958.2008.06189.x, 18399940
The cyanobacterial homologue of the RNA chaperone Hfq is essential for motility of Synechocystis sp. PCC 6803
Publication
Dienst D,
Dühring U,
Mollenkopf H,
Vogel J,
Golecki J,
Hess WR,
Wilde A
(2008)
Microbiology, 154, Pt 10, 3134-3143, 10.1099/mic.0.2008/020222-0, 18832319
Microbiology, 154, Pt 10, 3134-3143, 10.1099/mic.0.2008/020222-0, 18832319